by @stephenturner.us
Papers with Code! Looks for posts with links to GitHub and one of: pubmed, biorxiv, arxiv, medrxiv, oup (bioinformatics), nature, biomedcentral, science, genomebiology, cshlp (genome research), wiley, elsevier, pnas, plos. Created by @stephenturner.us (https://blog.stephenturner.us/)
The hashtags that come up most in this feed. The fastest read of its actual subject, rather than its description.
The most-liked posts we have captured from Papers with Code. Links go to the original on Bluesky.
Too many neuro preprints to keep track of, so I made a monthly ranking of the most-read ones on bioRxiv. Not a measure of quality, just what people are reading. Here's the fresh ranking for September: robertodf.github.io/biorxiv-top/
The first manuscript from my postdoc is out (doi.org/10.64898/202...)! We introduce ππ’π¦π-π¬ππ«πππ’ππ’ππ π¬ππππ’π¬ππ’ππ¬ for studying population structure change over time, with the temporal resolution of Ancestral Recombination Graphs (ARGs). Jointβ¦
Happy to share a new working paper: "Machine Learning Models Trained on a Longitudinal Survey Dataset Poorly Predict Hundreds of Life Outcomes" arxiv.org/abs/2610.17115 You can hear Emily Cantrell present it Thursday Oct 15 at Oxford: metrβ¦
Apple has published a paper & model based on Qwen 3.5 9B for processing large amounts of multi document text, compressed as images, LensVLM 9B: huggingface.co/bartowski/Le... github.com/apple-aiml-r... arxiv.org/abs/2605.07019
Happy to share our new preprint on MEM-CALVADOS! Work led by @rsaltutti.bsky.social extending CALVADOS to flexible proteins at lipid membrane interfaces. ποΈ doi.org/10.64898/202... π₯οΈ github.com/gitesei/MEM-... @vetenskapsradet.bsky.sociβ¦
New paper with Trang Nguyen! Do you have only a single parent and offspring, but still want to calculate mutation rates? We've got the tool for you--OOPS github.com/TrangNg-Th/O... www.biorxiv.org/content/10.6...
πPinned Post: Welcome to the papers with code feed! bsky.app/profile/did:... Papers from PubMed, bioRxiv, Bature, PLoS, etc, with links to GitHub will be included here. Anyone can post to this feed. See also: blog.stephenturner.us
Proud to present the publication of napari-lattice β our solution to the immense computational requirements of Lattice Light Sheet and Oblique Plane Microscopy. onlinelibrary.wiley.com/doi/10.1111/... Before I get into the thread, the iβ¦
Introducing Multi-Agent Self-Supervision (MASS): Recursive self-improvement through collective intelligence π§΅ Blog: pub.sakana.ai/mass/ Paper: arxiv.org/abs/2610.12176 Code: github.com/SakanaAI/mass
with tom-dages.bsky.social @dcremers.bsky.social @xiwang1212.bsky.social @phillipisola.bsky.social Paper: arxiv.org/abs/2610.09411 Code: github.com/dominik-schnaus/unpaired-rosetta Project page: dominik-schnaus.github.io/unpaired-rosetta
I love this so much! "A language model that only knows what a 5th grader knows." (arxiv.org/abs/2608.13545) littlelearner-ll.github.io
@gbouras13.bsky.social talking about his new protein structure-based bacterial genome annotation tool, Baktfold. π§«π§¬ GitHub: github.com/gbouras13/ba... Preprint: www.biorxiv.org/content/10.6... #ISME20
The accounts that appear most often in this feed.
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